Bases: unittest.case.TestCase
Test cases of the challenge base class.
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setUp()[source]
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test_build()[source]
Show that build is callable.
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test_calc()[source]
Show that calc is callable.
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test_class_attributes()[source]
Check setting of class attributes.
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test_fasta_strands()[source]
Check the method works as expected.
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test_format()[source]
Show that format writes result into output as string.
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test_format_list_of_integers()[source]
Show concatenation of list of integers.
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test_format_path()[source]
Show concatenation of list of nodes to a path.
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test_format_permuations()[source]
Show a list of permuations can be formatted.
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test_format_permuations_with_user_defined_separator()[source]
Show user defined separators can be used.
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test_format_permuations_with_user_defined_separator_of_length_zero()[source]
Show user defined separators can be used.
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test_instance_attributes()[source]
Check setting of instance attributes.
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test_instance_shadows_class_attribute_of_expect()[source]
Show that instance attribute shadows class attribute.
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test_instance_shadows_class_attribute_of_sample()[source]
Show that instance attribute shadows class attribute.
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test_line()[source]
Show that a line is retrievable by index.
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test_line_to_edge()[source]
Show lint_to_edge() works as expected.
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test_line_to_edges()[source]
Show lint_to_edges() works as expected.
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test_line_to_float()[source]
Show a line can be retrieved as float.
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test_line_to_floats()[source]
Show a line can be retrieved as floats.
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test_line_to_integer()[source]
Show a line can be retrieved as integer.
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test_line_to_integers()[source]
Show a line can be retrieved as integers.
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test_line_to_permuation()[source]
Show a line can be retrieved as permutation.
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test_line_to_permuation_surrounded_with_terminals()[source]
Show a line can be retrieved as permutation.
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test_line_to_permuation_with_parenthesis()[source]
Show a line can be retrieved as permutation.
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test_line_to_permutations()[source]
Show a line can be retrived as genome.
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test_line_to_words()[source]
Show that line_to_words() works as expected.
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test_lines_to_edges()[source]
Show lines_to_edges() works as expected.
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test_lines_to_floats()[source]
Show lines_to_floats() works as expected.
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test_lines_to_graph()[source]
Show lines_to_graph() works as expected.
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test_lines_to_integers()[source]
Show lines_to_integers() works as expected.
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test_lines_to_list()[source]
Show that lines_to_list() works as expected.
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test_lines_to_words()[source]
Show that lines_to_words() works as expected.
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test_read()[source]
Show that read creates list of lines.
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test_read_edges_from()[source]
Show reading edges self limiting.
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test_read_edges_from_to()[source]
Show reading edges limited by start and stop.
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test_read_edges_without_given_range()[source]
Show reading edges without given range starting from line 0.
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test_read_fasta_format()[source]
Show reading FASTA matches expected format.
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test_read_fasta_from()[source]
Show reading FASTA self limiting.
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test_read_fasta_from_to()[source]
Show reading FASTA limited by start and stop.
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test_read_fasta_without_given_range()[source]
Show reading FASTA limited by start and stop.